Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810587.1_cds_XP_016496276.1_10516
CDS Infomation

[gene=LOC107815235] [db_xref=GeneID:107815235] [protein=synaptotagmin-5-like] [protein_id=XP_016496276.1] [location=join(1328..1432,1582..1686,1826..1876,1996..2116,3597..3718,4980..5081,5677..5751,6454..6533,7155..7305,7418..7648,7732..8022,8170..8283,15778..15924)] [gbkey=CDS]
Sequence

ATGTCATTTGTTTTGGGACTTGTAGTTGGGCTTATGGTTGGAGTTGGTTTAATAGTTCTC
TTTGTTAAATCTGAAAATTCCCGATCCAAACTCCGTTCTGAACTGGCTACTACCATAGCA
GCGTTTGCTAGAATGACAGTGGAAGATTCCAGAAAGATTTTTACACCTGACCAGTATCCT
TCTTGGGTTGTTTTCTCCAATCAGCAGAAGTTGAAGTGGCTTAATTCTCATCTTGAAAAG
CTCTGGCCTTATGTAGATGAGGCAGCATCAGAATTGGTAAGGTCAAGTGTGGAGCCAATT
TTAGAACAATATAGACCTATGATTTTGGCTTCATTGAAATTTTCCAAGTTTACTCTTGGT
ACTGTTGCTCCTCAATTCACAGGAATTTCTATTCTTGAAGATGGAAGTGAAGGTATTACC
ATGGAATTAGAGATGCAATGGGATGGGAACCCTAGCATTATACTTGATATCAAGACATAT
GTTGGTGTAGGGTTACCAGTGCAGGTGAAAAACATTGGGTTTACTGGGGTTTTCAGGCTG
ATCTTCAGGCCGCTTGTTGATGAGTTTCCCTGCTTTGGAGCTGTTTGTTATTCACTAAGG
CAAAAGAAAAAGCTGGATTTTACGCTTAAAGTGGTTGGTGGTGACATGACAGCAATACCT
GGCATTTCTGATGCAATTGAGGGCACCATCCGCGATGCCATTGAAGACTCTATCACATGG
CCTGTTCGAAAAATTATTCCCATTTTGCCCGGGGATTATAGTGACCTTGAACTGAAGCCT
ACTGGAGTATTGGAGGTGAAACTTGTTCAAGCAAAGGAGTTAACAAACAAAGATCTCATT
GGTAAATCGGATCCTTTTGCTGAGTTATATGTCCGCCCTGTACGAGATAGAATGAAAAAG
AGCAAAACAATTAACAACCAATTGAACCCAGTGTGGAATGAGCATTTCGAGTTTGTAGTT
GAAGATCCATTGACACAACACTTAGTGGTAAAGATCTATGATGATGAAGGGCTTCAGGCA
GCTGAACTAATCGGATGTGCACATATCCGTTTAAATGAGCTCGAGCCTGGTAAGGTGAAG
GATGTCTGGTTGAAGTTGGTTAAAGATTTGGAGATCCAACGAGACCAAAAGAATAGGGGA
CAGGTGCACTTGGAGCTATTGTATTGTCCTTATGGCATGAAGAATGGGTTCAGTAACCCT
TTTGCGCCGAATGTGTCAATGACTTCACTGGAGAAGGTACTTAAAAGTGGAGCAGAAGGA
AACGTACTCCAAAACGGGGGTGAAATCAACAGGCGAAAGGACGTAATAGTACGGGGTGTA
CTTTCTGTAACGGTGATATCAGCTGATGATCTGGCGCCAACTGATCTAATGGGGAAAGCT
GATCCTTATGTTGTGATTACTATGAAGAAGACTGAAACCAAGAACAAAACCAGGGTTGTA
CCAGAAAGTTTAAATCCCGTGTGGAATCAGACTTTTGACTTTGTCGTTGAGGATGGGTTA
CATGATATGCTAATTTTAGAAGTGTGGGACCATGACACCTTCGGAAAGGATTACATGGGA
AGATGCATACTGACATTGACAAAAGTACTAATGGAAGGAGAATATAAAGAAAGCTTTGAA
TTAGATGGAGCTAAATCAGGGAAACTCAACTTGCATCTCAAATGGGCACCGCAGCCCATA
TATAGGGACTCCTAA

Peptide Sequence

PEP ID

XP_016496276.1
PEP Infomation

PREDICTED: synaptotagmin-5-like [Nicotiana tabacum]
Sequence

MSFVLGLVVGLMVGVGLIVLFVKSENSRSKLRSELATTIAAFARMTVEDSRKIFTPDQYP
SWVVFSNQQKLKWLNSHLEKLWPYVDEAASELVRSSVEPILEQYRPMILASLKFSKFTLG
TVAPQFTGISILEDGSEGITMELEMQWDGNPSIILDIKTYVGVGLPVQVKNIGFTGVFRL
IFRPLVDEFPCFGAVCYSLRQKKKLDFTLKVVGGDMTAIPGISDAIEGTIRDAIEDSITW
PVRKIIPILPGDYSDLELKPTGVLEVKLVQAKELTNKDLIGKSDPFAELYVRPVRDRMKK
SKTINNQLNPVWNEHFEFVVEDPLTQHLVVKIYDDEGLQAAELIGCAHIRLNELEPGKVK
DVWLKLVKDLEIQRDQKNRGQVHLELLYCPYGMKNGFSNPFAPNVSMTSLEKVLKSGAEG
NVLQNGGEINRRKDVIVRGVLSVTVISADDLAPTDLMGKADPYVVITMKKTETKNKTRVV
PESLNPVWNQTFDFVVEDGLHDMLILEVWDHDTFGKDYMGRCILTLTKVLMEGEYKESFE
LDGAKSGKLNLHLKWAPQPIYRDS

Transcript Sequence

Gene sequence data has not been registered.